Standard germination test
Analysis of the standard germination test (Table 2) revealed that the intensity and developmental stage of defoliation significantly affected thousand seed weight (TSW) and germination energy (GE). The most pronounced negative effect was observed in the R1 100% treatment, where complete defoliation at the flowering stage resulted in reduced TSW and GE, accompanied by an increased number of abnormal seedlings (AT). This indicates that complete defoliation during the reproductive stage limits the accumulation of seed reserves and compromises seedling uniformity. In contrast, the R1 67% treatment exhibited an adaptive response-seeds showed higher GE and fewer AT, suggesting that partial defoliation can stimulate compensatory mechanisms and maintain seed vigor. The results indicate that the timing and intensity of defoliation directly affect the balance between the loss of photosynthetic potential and the plant’s adaptive responses.
Biochemical parameters
The analysis of biochemical parameters further elucidated the physiological basis of these differences. Lipid peroxidation (LP), an indicator of oxidative membrane damage, was reduced in the V1 33% and R1 100% treatments, suggesting that moderate stress during the early vegetative stage activates antioxidant mechanisms, whereas complete defoliation at the flowering stage reduces metabolic activity due to limited resources. Free proline (FP), a well-known osmoprotectant, was lower in the V1 100% and R1 33% treatments, indicating limited osmoprotectant accumulation under metabolic stress. These results indicate that the stage and intensity of defoliation influence oxidative status and osmolyte metabolism, directly affecting seed vigor and quality.
Cold test
Results from the cold test confirmed the adaptive potential of seeds under stress. Partial defoliation during the vegetative stage (V1 33%) enhanced germination under unfavorable conditions (C-GP), indicating a priming effect -the activation of protective mechanisms that increase seed resistance. Complete defoliation at the flowering stage (R1 100%) reduced TSW and compromised germination, confirming that extreme stress during critical stages has long-term detrimental effects on seed quality.
The obtained results are consistent with previous studies showing that severe defoliation during reproductive stages reduces seed reserve accumulation and negatively affects seed quality, particularly when carbohydrate availability is limited
(Parvej et al., 2025). Seed physiological traits, including longevity and stress-related metabolites such as free proline and lipid peroxidation, are strongly influenced by seed maturation conditions
(Miladinov et al., 2021). In legumes, complex genetic and metabolic regulators interact with environmental stressors during seed development, determining seed longevity and quality
(Wang et al., 2021). Overall, the intensity and timing of defoliation are key factors determining seed quality and germination performance in soybean.
Interaction between defoliation and year
Analysis of the interaction between defoliation and year of production revealed a significant impact of climatic factors on soybean responses to leaf loss stress. During the two-year experiment (2024-2025), meteorological data (Table 1, Fig 1) showed marked differences in temperature and precipitation, which influenced both the growing conditions and the developmental dynamics of the plants. Under these conditions, the effects of defoliation were modulated by the interaction with climatic stress.
Standard germination test
Analysis of the standard germination test (Fig 1) demonstrated that germination values in 2024 were considerably higher across all defoliation treatments, likely due to more favorable and evenly distributed growing conditions. In contrast, the lowest GE and GP were recorded in 2025, particularly under complete defoliation at the flowering stage (R1 100%), highlighting the cumulative negative impact of defoliation combined with adverse climatic conditions during critical plant growth stages. A similar trend was observed for AT and DS, which showed increased values in 2025, especially under severe defoliation stress. These results suggest disturbances in seedling morphogenesis caused by intensified oxidative and osmotic stress resulting from unfavorable combinations of temperature and soil moisture.
Biochemical parameters
In 2025, elevated LP and FP values, particularly under 67% defoliation at R1, reflected enhanced oxidative stress and activation of osmoregulatory pathways, most likely representing an adaptive plant response to the combined stress of defoliation and unfavorable climatic conditions. Conversely, lower and more stable values of these parameters in 2024 indicate that plants experienced more adequate conditions to maintain physiological balance, even under defoliation stress.
Cold test
Cold test results further confirmed that seeds produced in 2024 exhibited greater tolerance to low temperatures, especially under mild defoliation (V1 33%), suggesting a possible “priming” effect, whereby moderate stress under favorable conditions stimulates protective mechanisms. In 2025, however, seeds showed reduced tolerance and increased sensitivity to cold stress, particularly under complete defoliation at flowering (R1 100%).
These findings confirm previous studies showing that the most sensitive stages of soybean seed development to defoliation-induced limitations of photoassimilates occur during early reproductive growth, leading to significant reductions in seed mass and quality
(Poudel et al., 2025). Seed longevity and physiological quality in legumes depend on complex intrinsic and extrinsic factors, including environmental stress during seed maturation, which directly affects germination potential and vigor
(Ramtekey et al., 2022). Osmoprotectants such as proline play a key role in mitigating abiotic stress by stabilizing cellular structures and maintaining osmotic balance, thereby enhancing plant stress resilience
(Leonova et al., 2024). Similar adaptive responses to moderate early-stage stress have been reported in other legumes, where controlled stress increases the accumulation of protective metabolites and improves seed performance under adverse conditions.
Interaction of defoliation and cultivar
The impact of defoliation on seed quality is often modulated by the genetic background of the cultivar (Fig 2). Different soybean cultivars may exhibit distinct physiological and biochemical responses to leaf loss, depending on their inherent tolerance mechanisms and growth characteristics. Therefore, evaluating cultivar-specific reactions to defoliation intensity is essential for understanding adaptive responses and optimizing seed production practices.
Standard germination test
Examination of germination parameters revealed cultivar-dependent responses. Only the R1 100% treatment caused a significant reduction in TSW in both Fortuna and Rubin, indicating that complete defoliation at flowering severely restricts seed reserve accumulation across genetic backgrounds. In Fortuna, defoliation did not significantly affect GE, whereas in Rubin, the V1 33% treatment increased GE, suggesting that partial vegetative defoliation may trigger adaptive mechanisms in this cultivar. No significant differences in GP were observed between treatments and controls in either cultivar. AT and DS also showed cultivar-specific patterns. In Fortuna, AT decreased under R1 33% and R1 66% treatments, whereas R1 100% increased DS. In Rubin, only the R1 100% treatment decreased DS, highlighting differential susceptibility of cultivars to severe defoliation.
Biochemical parameters
LP and FP responses varied between cultivars. In Fortuna, LP increased under V1 67% and R1 67% but decreased under V1 33% and R1 100%. In Rubin, all defoliation treatments lowered LP compared to the control. FP in Fortuna decreased under V1 33% and R1 100%, whereas in Rubin, it decreased under V1 100% and R1 33% but increased under R1 100%. These results indicate cultivar-specific activation of oxidative and osmoregulatory pathways in response to defoliation stress.
Cold test
C-GP increased in Fortuna under all defoliation treatments, while no significant effects were observed in Rubin. C-AT showed no significant differences between treatments and controls in either cultivar. In Fortuna, C-DS decreased under all treatments, whereas in Rubin, only R1 100% resulted in an increase. These findings suggest that cultivar identity influences the adaptive capacity of seeds under low-temperature stress following defoliation.
The results indicate that the genetic background of cultivars shapes their physiological and biochemical responses to defoliation. Differences in TSW and other performance traits under complete defoliation at flowering confirm that the developmental stage of stress critically affects reserve accumulation and subsequent seed performance. Variations in metabolites such as free proline and lipid peroxidation products reflect cultivar-specific regulation of oxidative and osmotic stress, which is key for maintaining seed vigor
(Miladinov et al., 2021). These findings highlight the importance of considering both cultivar genetics and defoliation timing in seed production strategies to preserve seed quality and enable adaptive physiological responses.
Multivariate analysis of physiological and biochemical seed traits
The PCA biplot illustrates the distribution of physiological and biochemical seed traits along the first two principal components, allowing evaluation of their interrelationships and collective response to defoliation stress (Fig 3). Traits associated with seed deterioration-AT, DS and C-DS-were grouped in the same direction, indicating strong positive correlations among these variables and their common involvement in seed quality degradation under stress conditions.
In contrast, traits related to seed vigor and germination-GP, GE, C-GP and TSW-were oriented in the opposite direction, revealing strong negative correlations with deterioration-related traits. This spatial separation confirms that increased occurrence of abnormal seedlings and dead seeds is directly associated with reduced seed vigor and germination performance.
Biochemical markers-FP, LP and C-AT-occupied an intermediate, orthogonal position relative to the deterioration and germination groups. This pattern suggests that these variables are partially independent of the main physiological axis of seed quality, reflecting specific stress-responsive biochemical and cold-sensitive processes. In particular, FP and LP appear to represent adaptive and oxidative stress responses to defoliation, while C-AT links stress exposure to impaired seedling development under suboptimal temperature conditions.
Overall, PCA separated seed traits into three distinct functional groups: (i) deterioration and loss of seed quality (AT, DS, C-DS), (ii) seed vigor and germination performance (GP, GE, C-GP, TSW) and (iii) stress-responsive biochemical and cold-sensitive indicators (FP, LP, C-AT). These findings confirm that defoliation acts as a stress factor that disrupts seed physiological stability while simultaneously activating biochemical response mechanisms that are not directly reflected in final germination outcomes.