Macroscopic and microscopic observation
Table 1 shows that yeast isolates tpi 01, tpi 02, tpi 03 and tpi 04 share the same colony morphology characteristics: round shape, butyrous texture, shiny and smooth surface, convex elevation and entire edges. Isolate tpi 05 exhibits irregular shape, friable texture, white color, dull and rough surface, umbonate elevation and filamentous edges. Meanwhile, isolate tpi 06 exhibits irregular shape, membranous texture, cream color, dull surface, flat elevation and undulate edges. Meanwhile, morphology characterization showed that tpi 02, tpi 03 and tpi 04 share the same cell morphology characteristics: round, oval and elliptical shapes with no hyphae or pseudohyphae. Isolates tpi 01 and tpi 05 presence of pseudohyphae and round shape. Isolate tpi 06 exhibiting elliptical and oval shapes with no hyphae or pseudohyphae. The six yeast isolates exhibited multilateral budding and did not form capsules.
Physiological and biochemical properties
Yeast isolate pH
Table 2 shows that the six isolates exhibit varying pH levels, ranging from 4.39 to 5.16. Isolates tpi 02 and tpi 04 exhibited the lowest pH among the isolates, indicating that these isolates produce more acid, leading to the lowest pH compared to other isolates.
Sugar fermentation test
Isolates tpi 02, tpi 03, tpi 04 and tpi 05 showed a strong positive reaction to glucose, sucrose, maltose and galactose but negative reaction to lactose. Isolate tpi 06 only showed a strong positive reaction to glucose (Table 2).
Urease test
The six isolates showed positive results on urea test (Table 2). This suggests that these yeasts can hydrolyze urea in the media.
Enzymatic
Proteolytic assay
Table 3 shows isolate tpi 06 exhibited proteolytic activity with a clear zone of 36 mm. According to
(Sabaria et al., 2024), an isolate with a PI <1 is considered to have a low PI.
Amylolytic test
Isolates tpi 02, tpi 03, tpi 04 and tpi 05 exhibited amylolytic activity with amylolytic index (AI) values ranging from 0.22 to 0.96 (Table 4). This clear zone formation occurs through a process where starch reacts with iodine, forming a complex compound that appears dark blue
(Sukmawati et al., 2021).
Fermented chicken eggs
The selected yeast isolates used as a starter for fermented chicken eggs, tpi 04, tpi 05 and tpi 06, represent three different genera: Candida, Hyphopichia and Pichia. In this study, the activity of yeast as a starter for fermented chicken eggs was observed through the pH of fermented chicken eggs, total yeast count and reducing sugar content.
pH of fermented chicken eggs
The pH value of TA 1 has an average of 5.84±0.08
a and a CV value of 1% (Fig 1). TA 2 has an average pH of 6.20±0.35
b and a CV of 6%. TA 3 has an average pH of 5.83±0.09
b and a CV of 2%.
Total yeast
Fig 2 shows that the total yeast count for TA 1 has an average value of 1.5×10
5a CFU/mL with and a CV of 20%. TA 2 has an average value of 1.6×10
5a CFU/mL and a CV of 4%. TA 3 has an average value of 4.7×10
4b CFU/mL and a CV of 25%.
Reducing sugar content
The reducing sugar content in fermented chicken eggs for TA 1 has an average value of 0.060%±0.0082
b and a CV of 14% (Fig 3). TA 2 has an average value of 0.068%±0.005
a and a CV of 7%. TA 3 has an average value of 0.058%±0.005
b and a CV of 9%.
The results of identification to the yeast genus level in this study are referenced from “The Yeast: A Taxonomic Study” by
Kurtzman et al., (2011).
Genus candida
Based on the results, the yeast isolates identified as potentially belonging to the genus Candida included tpi 01, tpi 02, tpi 03 and tpi 04. Candida typically exhibit macroscopic colony morphology characterized by white to cream color, round shape, convex elevation and smooth surface. According to
Sachivkina et al., (2021), Candida cells are generally round to elongated, with or without pseudohyphae and reproduce asexually through multilateral budding. Research conducted by
Saikia et al. (2024), Candida produced white to creamy, smooth and butyrous colonies and Genus Candida does not have capsules. Yeasts of this genus can typically grow in a pH range of 3-7
(Sherrington et al., 2017). They are known to ferment glucose, sucrose, maltose and galactose and have the capability to hydrolyze urea
(Nwaguma et al., 2019). According to
Modrzewska et al., (2016), several Candida species do not have proteolytic activity, such as
Candida guilliermondii,
Candida krusei,
Candida rugosa and
Candida lusitaniae. Furthermore,
de Souza et al. (2021) also found a Candida species that does not have proteolytic activity. Based on these characteristics, it can be concluded that isolates tpi 01, tpi 02, tpi 03 and tpi 04 exhibit traits consistent with the genus Candida (
Balia, 2014).
Genus hyphopichia
Based on the identification results, the yeast isolate tpi 05 exhibited characteristics similar to the genus Hyphopichia. Hyphopichia is identified having a white to pale white color, irregular shape, wrinkled and fibrous surface with raised elevations and filamentous edges. According to
Zhang et al., (2021), cell morphology of Hyphopichia is described as ovoid with pseudohyphal shapes and these yeasts reproduce asexually through multilateral budding. Genus Hyphopichia can ferment glucose, sucrose, maltose and galactose.
Ma et al., (2022) carried out the urease and pH tests of yeast in the genus Hyphopichia. The urease test produces a positive result, which is indicated by a color change to pink in the media and the optimal pH for growth is in weak acids, pH 4-7. Genus Hyphopichia can hydrolyze starch, indicating amylolytic activity. Hyphopichia does not exhibit proteolytic activity. Based on the characteristics that have been described, it can be concluded that isolate tpi 05 has similarities to the genus Hyphopichia, a fermentative yeast
(Wang et al., 2020).
Genus pichia
Based on the identification results, the yeast isolate tpi 06 is likely to belong to the genus Pichia. According to
(Abbas et al., 2019), Pichia have white to cream color, round to irregular shape, dull surface and flat elevation. Microscopically, the cells are ovoid, elliptical and elongated. Pichia reproduces asexually through multilateral budding and while some species may form pseudohyphae, true hyphae are rare (
Shrivastava and Sharma, 2023). A study found that the genus Pichia does not have capsules in its cells. Yeast pH, sugar fermentation tests and urease tests have varying results for each genus. The genus Pichia can grow at pH 2.5-7.5. Only glucose can be fermented by the genus Pichia and shown positif result on urea test (
Muñoz et al., 2022). Based on the characteristics that have been described, it can be concluded that isolate tpi 06 has similarities to the genus Pichia, an oxidative yeast.
pH, sugar reduction and total yeast of fermented chicken eggs
Fig 1 show that the pH values differ among the yeast genera used. For fermented chicken eggs with the genus Candida (TA 1), the average pH is 5.84; with the genus Hyphopichia (TA 2), it is 6.20; and with the genus Pichia (TA 3), it is 5.83. The decrease in pH is caused by yeast fermentation activity. As research conducted by
(Jagadeesh et al., 2022) shows, in yeast metabolism there is an increase in pH at the beginning, but along with the fermentation process, the pH value will decrease. The pH of fermented chicken eggs with the addition of the genus Pichia has the lowest value among the other genera. According to
Chu et al., (2023), Pichia can produce higher levels of organic acids compared to Candida due to its tolerance to low pH and organic acids. Fermented chicken eggs with the addition of the genus Candida have a slightly lower pH than those with the genus Pichia. A study by
(Bressani et al., 2020) indicates that the genus Candida produces oxalic acid and other organic acids.
Total yeast counts in fermented chicken eggs show that adding yeast starters of different genera results in varying average total yeast levels Fig 2. Candida genus produced an average total yeast count of 1.5×10
5 CFU/mL, Hyphopichia genus produced an average total yeast count of 1.6×10
5 CFU/mL, while Pichia genus produced an average total yeast count of 4.7×10
4 CFU/mL. The genus Pichia has the lowest total yeast count among the genera tested. According to
(Vicente et al., 2021), this is because Pichia can only ferment glucose, providing limited nutrition for growth. In contrast, the genera Candida and Hyphopichia produced higher total yeast counts compared to Pichia. According to
(Bao et al., 2021), the genus Pichia can rapidly consume sugar, leading to low reducing sugar content. Research conducted by
Nidhilangelo and Antony (2024) on cocoa beans shows that fermentation by yeast can reduce sugar levels up to 4 times the normal value. The coefficient of variation for each genus varies. The coefficient of variation for fermented chicken eggs with the addition of the genus Candida is 14%, for the genus Hyphopichia is 7% and for the genus Pichia is 9% (Fig 3).
Molecular identification of amylolytic yeast
In this study, the yeast genus that has the best ability as a starter in fermented chicken eggs is the genus Pichia. The resulting pH was 5.83, total yeast was 4.7×10
4 and the reducing sugar content was 0.058%. To see the type of species of this genus, molecular identification was conducted. BLAST results with genome data at the National Center for Biotechnology Information (NCBI) show that molecularly the yeast isolate tpi 06 is identified as
Pichia kudriavzevii with 99.5% homology. The construction of a phylogenetic tree for
Pichia kudriavzevii is detailed in Fig 4.