Secondary and tertiary structure prediction of fenugreek (Trigonella foenum-graecum) protein

DOI: 10.18805/lr.v39i1.8863    | Article Id: LR-3353 | Page : 48-51
Citation :- Secondary and tertiary structure prediction of fenugreek(Trigonella foenum-graecum) protein .Legume Research-An International Journal.2016.(39):48-51

Sharda Choudhary*, Ravindra Singh, R.S. Meena and Geetika Jethra

shardaajmer@yahoo.com
Address :

National Research Centre on Seed Spices, Tabiji, Ajmer-305 206, Rajasthan, India.
 

Submitted Date : 9-06-2014
Accepted Date : 31-03-2015

Abstract

In-silico development of protein models in fenugreek (Trigonella foenum-graecum) has opened up new vistas using the modern computational tools. The identification of protein in fenugreek having homology with the protein domain of humans and E-coli shows that the database available on Apiaceae family are very low. The estimated molecular weight of identified for fenugreek AM-1 protein was 11372.8 and was predicted as basic. A channel in fenugreek transmembrane protein has been identified through which a ligand (an ion or a small molecule) might pass. The present finding may be a valuable addition to the proteomic information available on fenugreek. Further validation can be performed using wet lab experiments.

Keywords

Hydropathicity PMDB Protein Script.

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