Phenotypic measurement
The results of the phenotypic measurement are presented in Table 1. The FIH group exhibited a significantly higher average daily feed intake during the 0-2 week stage than the FIL group (P<0.05). At 2-4 weeks of age, the FIL group had a significantly lower average daily feed intake than the MGO, FIH and MGS groups (P<0.01). Additionally, there was no significant difference between the FIH group and the MGO and MGS groups (P>0.05). At 4-6 weeks, the average daily feed intake of the MGO and FIL groups was significantly lower than that of the FIH and MGS groups (P<0.01). The difference between the FIH and MGS groups was not significant (P>0.05), nor was the difference between the MGO and FIL groups. Up to 6 weeks of age, the average daily feed intake of the FIL group was significantly lower than that of the MGO, FIH and MGS groups (P<0.01), with the average daily feed intake of the FIH group being the highest and not significantly different from that of the MGO and MGS groups (P>0.05).
Differentially expressed genes
A total of 2006 differentially expressed genes were identified, com-prising 1275 upregulated genes and 731 downregulated genes (Fig 2), whose differential expression shown in Fig 1. For the validation of sequencing results, we selected six genes related to food in-take that were differentially expressed: SS 2, hypocretin (orexin) neuropeptide precursor (HCRT), AG-RP, CCKAR, NPY and CARTPT. The results were verified using qRT PCR and were consistent with the transcriptome sequencing results (Fig 2), thus indicating the accuracy of the sequencing results.
Functional analysis
Cluster profile software was used to perform functional enrichment analysis of 2006 genes that were differentially expressed, with the entire genome serving as the background. A total of 5794 terms were enriched, with 4423 terms being significantly enriched. There were 41 terms enriched in biological process (BP). Cellular component (CC) was significantly enriched in 26 terms, with a total of 536 terms. There were 835 terms enriched in molecular function (MF), with significant enrichment in four terms. The 10 most significant terms in BP were regulation of neurogenesis, projection of neuronal morphogenesis (GO: 0048812), active regulation of synaptic transmission (GO: 0050806), cell morphogenetic projection of the plasma membrane (GO: 0120039), cell morphogenetic projection (GO: 0048858), negative regulation of cell development (GO: 010721), glutamate receptor signaling pathway (GO: 007215), negative regulation of neurogenesis (GO: 0050768), cell morphoge-nesis part (GO: 0032990) and negatively regulated nervous system (GO: 0051961. The 10 most signi-ficant terms in CC were postsynaptic specialization (GO: 0099572), Receptor complex (GO: 0043235), inner mitochondrial membrane protein complex (GO: 0098800), postsynaptic density (GO: 0014069), asymmetric synapse (GO: 0032279), synapses between neurons (GO: 0098984), synaptic part (GO: 0044456), respiratory chain complex (GO: 0098803), plasma membrane receptor complex (GO: 0098802) and respiratory chain (GO: 070469). The four significant terms in MF were GTP enzyme binding (GO: 0051020), small GTP enzyme binding (GO: 0031267), Ras GTP enzyme binding (GO: 0017016) and guanine nucleotide exchange activity factor (GO: 005085). Ten bar charts for BP, CC, and MF are illustrated in Fig 3 and the KEGG enrichment characteristics were shown in Fig 4.
The biological processes related to chick feeding encompassed behavior (GO: 0007610), feeding behavior (GO: 0007631), cellular response to hormone stimuli (GO: 0032870), hormone-mediated signaling pathway (GO: 0009755), neuropeptide signaling pathway (GO: 0007218) and regulation of signaling receptor activity (GO: 0010469). The genes that were differentially expressed and closely related to feeding behavior, as mentioned earlier in the GO results, included growth hormone (GH), GRM1, GRM3, recombinant glutamate receptor, metabotropic 7 (GRM7), chromogranin A (CGA), HCRT, CCKAR, AGRP and NPY.
Using the entire genome as a background, cluster profiling was employed to perform KEGG pathway enrichment analysis of 2006 genes that showed differential expression. The DEGs were enriched in 139 pathways, significantly enriched in seven pathways and highly enriched in 12 pathways. The analysis identified the following pathways: phosphatidylinositol signaling system (iga04070), ErbB signaling pathway (iga04012), focal junction (iga04510), regulation of actin cytoskeleton (iga04810), FoxO signaling pathway (iga04068), mTOR signaling pathway (iga04150), diabetes complications AGE-RAGE signaling pathway (iga04933), MAPK signaling pathway (iga04010), glutathione metabolism (iga00480), drug metabolism cytochrome P450 (iga00982), progesterone mediated oocyte maturation (iga04914), glyceride metabolism (iga00561), vascular smooth muscle contraction (iga04270), Apelin signaling pathway (iga04371), glycerophospholipid metabolism (iga00564), tight junction (iga04530), sheath phosphorus metabolism (iga00600) and gap junction (iga04540).
Differential metabolite screening
A total of 25 differential metabolites were screened by combining the VIP values (VIP >1) obtained from the PLS-DA model and the P-values obtained from a two-tailed Student’s t-test (VIP >1.0, multiple of difference FC >1.2 or FC <0.833 and P-value <0.05). Of these 25 differential metabolites, nine were upregulated and 16 were downregulated, comprising nine types of metabolites. The differential metabolites are listed in Table 2.
Differential metabolite analysis
A hierarchical clustering analysis was performed on two groups of differential metabolites and the differences in metabolic expression patterns were determined between and within the two groups for each comparison. The analysis suggested that the differences in relative quantitative values of metabolites between the two groups were highly significant (Fig 5). Metabolite products present in the hypothalamic tissue of Yao chickens, including goose carnosine and branched-chain amino acids, may stimulate feed intake, leading to a higher intake in the FIH level group compared to MGO, MGS and FIL. Metabolic products such as 5-hydroxytryptophan may have hindered feed intake in the FIL group. The KEGG analysis identified differential metabolites enriched in 26 pathways, with ID map02010 and name ABC transporters significantly enriched in one pathway. The enriched metabolites included D-mannose, 2-aminoethylphosphonate and L-valine. The entire pathway enriched by differential metabolites is presented in Table 3.
Regulatory genes
RNA sequencing of the hypothalamus of chicks in the FIH and FIL groups was conducted. A bioinformatic analysis was conducted using the DESeq method, resulting in the screening of 2006 genes that exhibited differential expression. Compared with the FIL group, the FIH group expressed 1275 genes whose levels were upregulated, along with 731 genes that were downregulated. The sequencing results were consistent with the RNA-seq results as verified by qRT PCR. The results suggested that lysine may play a crucial role in the feeding regulation of Yao chickens by adjusting the expression levels of differentially expressed genes. These genes related to food intake include NPY, HCRT, CGA, RLN3, PMCH, CCKAR, CCKBR, SS2, GH and NPBWR1.
The intake of food is directly linked to the growth and productivity of animals (
Cantalapiedra et al., 2018;
Singh et al., 2020). Food intake in animals is primarily controlled by the peripheral nervous system, the central nervous system and the endocrine system
(Chen et al., 2020). The hypothalamus regulates food intake through action on the central nervous system
(Niknafs et al., 2018). The neuropeptides synthesized and secreted by the hypothalamus that regulate appetite play a crucial role in controlling the feeding behavior of animals. These neuropeptides include AgRP and NPY in pufferfish and mice and cocaine- and amphetamine-regulated transcriptional peptides (CARTPT). Changes in the nutritional composition of the diet may affect the secretion of these appetite-regulating neuropeptides, ultimately influencing the animal’s food intake
(Tian et al., 2019).
Schwartz et al., (2016) showed that appetite-promoting neuropeptides (NPY/AGRP) are present in the hypothalamus of poultry and that they play a role in regulating food intake by releasing signaling molecules. According to
Sheng Wei et al., (2020), NPY is a crucial factor in the regulation of food intake. The qRT PCR validation in this study indicated that NPY expression in the hypothalamus was higher in the FIH group than in the FIL group and the feed intake of the FIH group was significantly greater than that of the FIL group. Hence, NPY serves as a promoting factor.
He et al., (2019) examined the effect of heat stress on hypothalamic integrity, serum indicators and hypothalamic appetite gene expression in broilers. Their findings revealed that heat stress decreased the expression of the appetite gene NPY in broilers, subsequently leading to a reduction in feed intake, consistent with the results of this study.
Bahry et al., (2017) examined the regulatory effect of central neuropeptide Y on monoamines and corticosteroids in chickens subjected to high temperatures and fasting. The results indicated that hypothalamic injection of NPY could counteract the reduction in food intake during heat stress and stimulate feeding in chickens, in agreement with the results of this study. AGRP is a neuropeptide that promotes food intake and it can directly sense changes in nutrients (sugars, fats and amino acids) (
Xiang Nana, 2016), projecting these signals through neuronal axons to the hypothalamus and thereby regulating animal food intake
(Bonilla et al., 2006). AGRP is a natural antagonist and agonist of melanocortical hormones. α-MSH competes with AGRP for binding to MC4R, inhibiting anorexia and promoting feeding
(Chai et al., 2003). In this study, the expression level of AGRP was higher in the FIH group than in the FIL group. The FIL group’s lower expression level of AGRP resulted in reduced food intake. SS 2, also referred to as SST 7, is a member of the somatostatin gene (SST) family that is predominantly expressed in avian autonomic neurons
(Nishi et al., 2010). According to
Stengel et al., (2015), somatostatin is a peptide hormone that consists of 14 amino acids and is primarily found in the nervous and digestive systems of animals. SST has a regulatory effect on the secretion of GH. During the growth process of animals, GH and insulin-like growth factors serve as the primary substances that regulate animal growth and development. Their secretion is doubly regulated by SST and GH-releasing factor (GRF). GRF can stimulate the release of GH, whereas SST can inhibit the release of GH (
Prévost et al., 1996;
Lin et al., 2001). Somatostatin, a well-known inhibitor of GH release
(Brazeau et al., 1973), is widely distributed throughout the brain.
Nakahara (2012) showed that feeding mice with a diet deficient in Val led to a notable elevation in hypothalamic somatostatin mRNA levels, suggesting that somatostatin may play a role in the regulation of amino acids.
Nakahara et al., (2012) demonstrated that the injection of somatostatin into the brain significantly decreased food intake in mice.
In this study, the FIL group had elevated levels of lysine and demonstrated an amino acid imbalance in their diet. Furthermore, the expression level of SS2 was greater in the FIL group than in the FIH group, resulting in a reduction in feed intake of chicks. In this study, SS 2 was identified as a feeding suppressor gene. Cocaine- and amphetamine-regulated transcript, also referred to as CART, is a pituitary peptide hormone that is under the strict control of GnRH in the hypothalamus for its expression and secretion. The hormone belongs to the category of anorexic neuropeptides and is an active molecule in the hypothalamic-pituitary-gonadal axis, with potential endocrine regulatory functions. CART is composed of either 41 or 48 amino acids and is present not only in hypothalamic tissue but also in the intestine. It plays a crucial role in animal feeding and the regulation of energy balance. Intracerebral injection of CART inhibits both gastric acid secretion and gastric emptying
(Mo et al., 2019). In their 2012 study, discovered that the injection of CART could suppress food intake in mice, leading to a significant increase in weight gain in the group without CART injection compared with the injection group. Research has shown that CART may directly affect body weight by mediating the activation of serotonin 4 receptors and influencing food intake. CART regulates the expression of thyrotropin-releasing hormone in the hypothalamus and the release of thyrotropin in the pituitary gland, which increases the consumption of brown adipose tissue, thereby influencing energy homeostasis and ultimately food intake
(Jean et al., 2007). This study employed qRT PCR to confirm that the expression of CARTPT in the hypothalamus was lower in the FIH group than in the FIL group, while the feed intake was higher in the FIH group than in the FIL group. CARTPT is thus an inhibitory factor in feed intake.
This study employed qRT PCR to confirm that the expression of CCKAR in the hypothalamus was lower in the FIH group than in the FIL group, while the feed intake was higher in the FIH group than in the FIL group. CCKAR inhibits feed intake. The sequencing results showed that the expression level of CCKBR in the hypothalamus of the FIH group was lower than that of the FIL group, while the feed intake of the FIH group was higher than that of the FIL group (
Schwartz, 2000;
Smith, 2012;
Tominaga et al., 2020). Specifically, CCK activates visceral sensory afferent receptor signals that send satiety signals to the hypothalamus, causing feeding to stop. According to
Baptista et al., (2005), CCK regulates food intake by inducing vagal activity mediated by the activity of glucagon-like peptide neurons in the hypothalamus. The effect of CCK on food intake may involve melanocortin receptors and melanocortin signaling in the dorsal vagus nerve of the hypothalamus, as suggested by
van den Pol (2003). Hence, CCK assumes a pivotal role in the regulation of feeding behavior through its involvement in visceral sensory inputs and potential signaling mechanisms that are also used by glucagon-like peptides, leptin and other factors associated with the regulation of feeding behavior
(Williams et al., 2012). Employed transcriptome technology to sequence the hypothalamus of broiler chickens fed with steviol. They discovered that steviol could stimulate feed intake by modulating the ligand-receptor interaction pathway of hypothalamic nerve activity. Conversely, NPY, NPY5R and TSHB are known to stimulate feed intake, whereas NMU, TPH 2 and DDC inhibit feeding. NPY, a neuropeptide, plays a crucial role in regulating feed intake in broilers by interacting with several receptor subtypes, including NPY, NPY2R and NPY5R. TSHB plays a vital role in the synthesis and secretion of thyroid hormones by activating the cAMP signaling pathway. NMU may induce anorexia in chickens by upregulating corticotropin-releasing hormone and arginine angiotensin in the central nervous system. The downregulation of TPH2 and DDC expression may impede dopamine production, resulting in an increase in food intake. The inclusion of steviol may regulate appetite signals in the hypothalamus, thus promoting feed intake
(Jiang et al., 2021). Conducted transcriptome sequencing of the hypothalamus of chickens that were injected with exogenous adiponectin. They discovered that feeding-related differential genes were significantly enriched in the neuroactive ligand-receptor interaction pathway. Further-more, adiponectin may stimulate appetite and increase food intake
via the POMC/CRH and NPY/AGRP signaling pathways. The expression of NPY and AGRP increases with the increase in adiponectin dosage and adiponectin may directly or indirectly upregulate NPY and AGRP to promote feed intake in chicks. The result may also be due to the downregulation of POMC to inhibit dopamine secretion and the downregulation of CRH to affect the HPA axis to promote appetite. This study has preliminarily confirmed the molecular mechanism through which adiponectin regulates food intake
via the hypothalamus
(Li et al., 2018). The interaction pathway of ligand-receptors in hypothalamic nerve activity plays a crucial role in regulating the feed intake of Yao chickens. At 0–6 weeks of age, high concentrations of lysine may directly or indirectly downregulate genes such as NPY and AGRP, upregulate the expression of the CARTPT gene and affect the HPA axis to curb appetite and regulate the feed intake of chickens.
Marked metabolites
Using LC-MS technology, this study examined the hypothalamic tissue of Yao chickens and investigated alterations in hypothalamic metabolites after 6 weeks of feeding varying levels of lysine. Through PLS-DA analysis, a total of 25 differential metabolites were obtained from groups FIH and FIL, including organic acids and their derivatives, amino acids and their derivatives and nucleotides and their derivatives. These metabolites were enriched in 26 pathways and significantly enriched in the ABC transporters pathway. According to a study conducted by de
Haas et al., (2018), serotonin is closely associated with the feeding behavior of chickens. This study indicates that lysine can regulate the appetite of broilers via serotonin and that a high content of lysine can decrease their feed intake. According to
Hui et al., (2020), 5-hydroxytryptamine (5-HT) is a monoamine neurotransmitter that regulates the function of both the central and peripheral nervous systems. Central serotonin (5-HT) is a neurotransmitter responsible for anorexia. After being released, serotonin exerts its effects by binding to serotonin receptors (HTRs), most of which are G protein-coupled receptors. According to
De et al., (2018), serotonin plays a significant role in the regulation of the hypothalamus in chickens through various pathways, including blood, hormones and the vagus nerve. In poultry, serotonin inhibits appetite, leading chickens to feel satiated (
Gillette, 2006). The regulation of decreased appetite by serotonin is primarily attributed to the hypothalamus. Specifically, serotonin enhances satiety and reduces food intake by influencing the hindbrain and hypothalamic circuits that regulate the stimulation of peripheral signals indicating energy status
(Pratt et al., 2021). The higher expression of 5-hydroxytryptophan in the hypothalamus of Group C than in Group B may be due to the activation of opioid precortical hormone neurons through the 5-HT2C receptor and the inhibition of NRY/AGRP-related protein in neurons through the 5-HT1B receptor, resulting in reduced food intake
(Heisler et al., 2002). Zendehdel et al., (2017) injected serotonin into the hypothalamus of chicks to reduce their feed intake. This was achieved through the regulation of adrenaline α 2 and β 2 receptors responsible for controlling the feeding behavior. The regulation of food intake, which primarily occurs in the hypothalamus, is a crucial process influenced by alterations in nutrient levels within the animal brain, as noted by
Delgado et al., (2017). The hypothalamus senses related hormone signals and is equipped with multiple nutrient perception mechanisms that can detect changes in the levels of glucose, fatty acids and amino acids
(Soungas et al., 2018). Valine plays a crucial role in the hypothalamic regulation of food intake. It is not metabolized directly into acetyl CoA but rather into propionyl CoA that is then converted into succinyl CoA and enters the tricarboxylic acid cycle. This glucose-type amino acid regulates glucose metabolism by acting on the hypothalamus, thereby enhancing satiety and reducing food intake
(Arrieta et al., 2016). In this study, the feed intake of Group C was lower than that of Group B and the expression of the metabolite valine was higher in Group C than in Group B. Valine may serve as a marker metabolite for high lysine levels, an amino acid known to inhibit feed intake in Yao chickens.