Indian Journal of Animal Research
Chief EditorM. R. Saseendranath
Print ISSN 0367-6722
Online ISSN 0976-0555
NAAS Rating 6.40
SJR 0.233, CiteScore: 0.606
Impact Factor 0.4 (2024)
Chief EditorM. R. Saseendranath
Print ISSN 0367-6722
Online ISSN 0976-0555
NAAS Rating 6.40
SJR 0.233, CiteScore: 0.606
Impact Factor 0.4 (2024)
Submitted22-08-2024|
Accepted04-02-2025|
First Online 16-05-2025|
Background: Microsatellite DNA sequencing has emerged as an important method for determining genetic variety and parentage in domesticated species, including popular dog breeds. The role of microsatellite markers helps in understanding the genetic landscape of dog breeds in India, where the growing popularity of particular breeds has generated worries about inbreeding and loss of genetic variety.
Methods: For the parentage testing in canine microsatellite length, polymorphism markers were used to check the efficacy of the markers. In the current study 5 fluorescently labeled 12 SSR markers were used to check the use of the markers in popular owned-dog breeds (Labrador, German Shepherd, Pug, Mudhol Hound, Tibetan Mastiff, Gaddi dog, Beagle, Belgian Malinois, Pointer, and Cane Corso). The number of alleles, heterozygosity, polymorphism information content and probability of exclusion were determined for all the markers to check the effectiveness of the markers.
Result: The analysis utilized a panel of microsatellite markers to evaluate genetic variation among several breeds including Punjab, Haryana, Himachal Pradesh and Karnataka. The mean number of alleles per locus ranged from 5 to 29 and the effective number ranged from 3.6 to 15.2. The expected heterozygosity was greater than 0.73. The population inbreeding coefficient (FIS) demonstrated that there was no inbreeding in the breeds studied. The polymorphism information content and the probability of the exclusion values were greater than 0.65. The combined probability of exclusion for all the breeds was (2.82E-12) 0.99999995. The findings revealed that the 12 particular microsatellite markers chosen for paternity testing demonstrated substantial exclusion probability for determining parentage.
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