A total number of 250 HF-cross breed cows belonging to different unorganized farms located in and around Shirwal town, Dist. Satara, Maharashtra, India, were screened for the presence of mastitis by California Mastitis Test (CMT). CMT-positive samples were considered for further processing. Samples were brought to the laboratory on ice and processed immediately. Collected mastitic milk samples were subjected to the isolation of organisms as per the standard methods described in Bergey’s Manual of Systematic Bacteriology, 1986. The samples were inoculated on media such as Blood agar and Nutrient agar and other selective and differential media such as Mannitol salt agar (MSA), MacConkey agar and Eosin methylene blue (EMB) agar. Inoculated plates were incubated aerobically at 37°C for 24 hours and examined for growth, pigmentation, hemolysis and colonial morphology. Yellow, round colonies presumptive of
S. aureus were further confirmed by biochemical tests and PCR assay. Extraction and purification of DNA of
S. aureus was carried out by snap chill method
(Alwan and Talak, 2015). Briefly, pure colonies were selected from the Mannitol Salt agar and mixed with 150 µl of nutrient broth. Then this mixture was boiled for 10 min at 91°C and immediately kept in crushed ice for snap chilling for about 10 min. After chilling tubes were centrifuged at 10000 rpm for 10 min. The supernatant was used as template DNA. Purified DNA were processed for
S. aureus-specific 16s-rRNA gene
(Akindolire et al., 2015) as well as species-specific
nuc gene PCR
(Zhang et al., 2004). The primer sequences employed were 16s-rRNA F 5'GTAGGTG GCAAGCGTTACC3' 16s-rRNA R 5’CGCACATCAGCG TCAG3' and
nuc F 5'GCGATTGATGGTGATACGGTT3'
nuc R 5'AGCCAAGCCTTGACGAACTAAAGC3', respectively. The reaction was carried out in 25 µL volumes. Each PCR reaction mixture comprised 12.5 µL Himedia PCR mix, 1 µL each of forward and reverse primers, 3 µL of DNA and volume was made up to 25 µL using nuclease-free water. PCR amplification conditions for 16s-rRNA consisted of: Initial denaturation at 94°C for 05 min; followed by 30 amplification cycles of denaturation at 94°C for 30 sec, annealing at 64°C for 30 sec and extension at 72°C for 1 min, final extension step at 72°C for 5 min, before cooling to 4°C. To carry out PCR amplification for
nuc gene, the master mix was the same as described above, The PCR conditions were as follows: Initial denaturation at 94°C for 05 min; followed by 30 amplification cycles of denaturation at 94°C for 1 min, annealing at 50°C for 1 min and extension at 72°C for 2 min, final extension step at 72°C for 10 min, before cooling to 4°C (Table 1).
Antibiogram sensitivity patterns of target organism
S. aureus isolates (n=170) from mastitis milk were interpreted using the Kirby Bauer disc diffusion method
(Bauer, 1966) using commercially available antibiotic discs of M/s HiMedia Laboratories Pvt. Ltd., India, as per Clinical and Laboratory Institute (CLSI, 2018) guidelines (Table 2). Studies were aimed at the detection of AMR in
S. aureus isolated from mastitis against multiple classes of antibiotics hence, analysis of multiple antibiotic resistance and the genes expressing it in
S. aureus was performed by PCR with multiple oligonucleotide sequence primers (Table 3). AMR genes like
mecA gene for methicillin,
tetK,
tetM for Tetracycline,
ermA,
ermC for Macrolide, Lincosamide,
aacA for Aminoglycosides,
vanA,
vanB genes for Vancomycin resistance,
mrsA,
mrsB genes for Macrolide resistance were evaluated in three different sets of Multiplex PCR. In set I Multiplex PCR of
mecA,
ermA,
ermC,
tetK,
tetM,
aacA, While Set II Multiplex PCR was performed for
vanA and
vanB and Set III for
mrsA and
mrsB genes. For efficacy studies of GAgNP 10 isolates of exhibiting resistance to more than three antibiotics identified as MDRSA were randomly chosen having CFU much above permissible reference range (Mean range of 7.161±0.00866 to 9.083333±0.025783) for efficacy studies of GAgNPs.
For this study preparation of green silver nanoparticles were synthesized from Silver Nitrate reduced with
Azadirachta indica leaf extract as per
Roy et al., (2017) with slight modifications (Fig 1). Fresh green fully grown leaves were collected and thoroughly washed, twenty grams of it were finely chopped, added to 100 ml of double-distilled water and boiled for 10 min. The extract was cooled, filtered and stored in the refrigerator at 4°C-8°C until further use. Silver nitrate solution 0.1N (HiMedia Pvt. Ltd., India) was used for the green synthesis of GAgNPs. A set of 05 clean sterile test tubes were taken and labelled. Then 1 mL, 2 mL, 3 mL, 4 mL and 5 mL of neem extract respectively, were added to test tubes and 1ml of silver nitrate solution was added to each test tube. The test tubes were covered with silver foil and the entire set was incubated in the dark chamber to minimize the photo-activation of silver nitrate at room temperature for 48 hours. The color change from colorless to brown confirmed the reduction of silver ions. The optical density of the extract was measured to determine the concentration of GAgNPs formed by taking 50 µL of each in an ELISA plate and using an ELISA reader at different wavelengths of 405 nm, 420 nm and 450 nm, to record peak absorbance. The synthesis of GAgNP, their size and their antimicrobial activity against random ten isolates with MDRSA was evaluated with the Agar well diffusion method, MIC. Also Transmission Electron microscopy (TEM) images of GAgNP were taken by an Electron Microscope (JEOL JEM- 1011 100 kV model) (Fig 2).
To determine the effective GAgNP prepared from the suitable ratio of silver nitrate to neem leaf extract for implementation in the actual efficacy studies, it was first assessed for its efficacy by agar well diffusion test as per
Roy et al., (2017) in five different ratios of neem extract to silver nitrate: N1 (1:1), N2 (2:1), N3(3:1), N4(4:1), N5(5:1).
The antimicrobial activity of the prepared GAgNP was assessed by performing the MIC using the method described by
Loo et al., (2018) with slight modification. The MIC was performed in a 96-well flat-bottom micro-titer plate using the broth micro-dilution method. The bacterial inoculums were adjusted to the concentration of 105 CFU/mL samples as described in the manual of the
American Society for Microbiology (2016). The 100 µL stock solution of GAgNPs were added in duplicate plates, one for RPMI and other for MBC. The drug was further diluted two-fold in 100 µL of NB starting from the highest concentration in column 12 to the lowest in column 03 while, column 01 served as the negative control (only medium) and column 02 served as the positive control (medium and bacterial inoculums). Each well of the microtiter plate was added with 100 µL of bacterial inoculums except negative control. Every well was added with 30 µL of the Resazurin solution and readings were taken after incubation at 37°C for 3 h, 6 h, 9 h, 12 h and 24 h, respectively. The mixture in every well was observed for visible change in color as per protocol of test, wherein, blue /purple color indicated no bacterial growth while the pink color or no change in color indicated bacterial growth in the well. Simultaneously, MBC (minimum bactericidal concentration) was checked by inoculating the mixtures of drug dilutions and bacterial inoculum mixtures in every wells of ELISA plate by inoculating it on agar plates and observing plates for any growth of MDRSA after incubation of 24 h. The lowest effective broth dilution of GAgNPs was considered as effective MBC value. The synthesized GAgNPs were also comparatively tested for antibacterial properties against commercially available nanoparticles procured from GreenVision Life Sciences Pvt. Ltd., Pune, India, against MDRSA.