Indian Journal of Animal Research

  • Chief EditorK.M.L. Pathak

  • Print ISSN 0367-6722

  • Online ISSN 0976-0555

  • NAAS Rating 6.50

  • SJR 0.263

  • Impact Factor 0.4 (2024)

Frequency :
Monthly (January, February, March, April, May, June, July, August, September, October, November and December)
Indexing Services :
Science Citation Index Expanded, BIOSIS Preview, ISI Citation Index, Biological Abstracts, Scopus, AGRICOLA, Google Scholar, CrossRef, CAB Abstracting Journals, Chemical Abstracts, Indian Science Abstracts, EBSCO Indexing Services, Index Copernicus
Indian Journal of Animal Research, volume 50 issue 6 (december 2016) : 958-963

Association of caprine lymphocyte antigen-DRB3 gene with gastrointestinal nematode resistance in Sirohi and Barbari breeds of goat

Alok Kumar Yadav*, S.S. Tomar, Amit Kumar, M.S. Thakur
1<p>Department of Animal Genetics and Breeding, College of Veterinary Science and Animal Husbandry, NDVSU, Campus Jabalpur-482 001, India</p>
Cite article:- Yadav* Kumar Alok, Tomar S.S., Kumar Amit, Thakur M.S. (2015). Association of caprine lymphocyte antigen-DRB3 gene with gastrointestinal nematode resistance in Sirohi and Barbari breeds of goat . Indian Journal of Animal Research. 50(6): 958-963. doi: 10.18805/ijar.5710.

The present study was conducted on Sirohi and Barbari goat breeds to investigate the association of polymorphic variants with gastrointestinal nematode resistance in these goats. A total of 60 animals comprising 30 each of the two breeds selected randomly were included in the study. Genomic DNA isolated from venous blood was amplified for caprine lymphocyte antigen-DRB3 gene with specific primer by standardizing and optimising the PCR protocols. The PCR product of genomic DNA isolated from kids of Sirohi and Barbari breeds of goat on digestion with restriction enzyme Pst1 revealed three genotypes viz., AA, AB and BB with genotypic frequencies of 0.53, 0.37 and 0.10, respectively in Sirohi and 0.73, 0.20 and 0.07 in Barbari breed. The frequencies of A and B alleles were 0.72 and 0.28 in Sirohi and 0.83 and 0.17 in Barbari breed, respectively. Both the breeds were in Hardy-Weinberg equilibrium for these variants and were homogeneous with respect to their distribution. The effects of breed, genotype as well as their interaction were found to be non-signinficant. There were no significant association between genotypes at CLA-DRB3 locus and eggs per gram (EPG) count in both the breeds. It was concluded that this CLA-DRB3 gene locus cannot be used for selection of goats for nematode resistance in the present herd.


  1. Ahmed, S. and Othman, O.E. (2006). A PCR-RFLP method for the analysis of Egyptian Goat MHC Class II DRB gene. Biotechnology, 5:58-61.

  2. Amills, M., Francino, O. and Sanchez, A. (1995). Nested PCR allows the characterization of TaqI and PstI RFLPs in the second exon of the caprine MHC class II DRB gene. Veterinary Immunology and Immunopathology, 48:313-321.

  3. Amills, M., Francino, O. and Sanchez, A. (1996). A PCR- RFLP typing method for the caprine MHC class II DRB gene, Veterinary Immunology and Immunopathology, 55:255-260.

  4. Amills, M., Sulas, C., Sanchez, A., Bertoni, G., Zanoni, R. and Obexer-Ruff, G. (2004). Structural characterization of the caprine major histocompatibility complex class II DQB1 (Cahi-DQB1) gene. Molecular Immunology, 41:843-846.

  5. Baghizadeh, A., Bahaaddini, M., Mohamadabadi, M.R. and Askari, N. (2009). Allelic Variations in Exon 2 of Caprine MHC Class II DRB3 Gene in Raeini Cashmere Goat. American-Eurasian Journal of Agricultural and Environmental Science, 6(4):454-459.

  6. Beh, K. J. and Maddox, J. F. (1996). Prospects for development of genetic markers for resistance to gastrointestinal parasite infection in sheep. International Journal for Parasitology, 26:879-897.

  7. Eady, S.J., Woolaston R.R. and Barger, I.A. (2003). Comparison of genetic and non-genetic strategies for control of gastrointestinal nematodes of sheep. Livestock Production Science, 81:11–23. 

  8. Harvey, W.R. (1990). User’s Guide for LSMLMW and MIXMDL, Mixed Model Least – Squares and Maximum Likehood Computer Program. PC-2 version. The Ohio State University, Columbus, USA.

  9. Hernandez, T. S. (2011). DRB molecular gene polymorphism: MHC II in goats of the central highlands of Veracruz. Ph.D Thesis (Faculty of Veterinary Medicine), Universidad Veracruzana Veracruz, México.

  10. John, S. W., Weitzner, G., Rozen, R. and Scriver, C.R. (1991). A rapid procedure for extracting genomic DNA from leukocytes. Nucleic Acids Research, 19(2):408. 

  11. Kahn, L.P., Knox, M.R., Gray, G.D., Lea, J.M. and Walkden-Bown, S.W. (2003). Enhancing immunity to nematode parasites in single bearing Merino ewes through nutrition and genetic selection. Veterinary Parasitology, 112(3):211–225.

  12. Khobra, V., Gupta, S.C., Gopal, G.R., Narayanan, K., Prasad, A., Kumar Praveen, Saravanan,B.C., Sharma, A.K., Rajesh, V., Maurya, P.S. and Sankar, M. (2013). Major Histocompatibility class II DRB3 exon 2 polymorphism and resistance to gastrointestinal nematodes in Jamunapari goats. Journal of Veterinary Parasitology, 26(2):108-111. 

  13. Sayers, G., Good, B., Hanrahan, J.P., Ryan, M. and Sweeney, T. (2006). Intron 1 of the interferon gamma gene and its role in nematode resistance in Suffolk and Texel sheep breeds. Research in Veterinary Science, 79(3):191-196.

  14. Sayers, G., Hanrahan, J.P., Good, B., Ryan, M., Angles, J.M. and Sweeney, T. (2005). Major histocompatibility complex DRB1 locus, its role in nematode resistance in Suffolk and Texel sheep breeds. Parasitology. http://www.ncbi.nlm.nih.gov/pubmed.

  15. Schwaiger, F.W., Gostomski, D., Stear, M.J., Duncan, J.L., McKellar, Q.A., Epplen, J. T. and Buitkamp, J. (1995). An ovine major histocompatibility complex DRB1 allele is associated with low faecal egg counts following natural, predominantly Ostertagia. International Journal for Parasitology, 25: 815–822.

  16. Sheikh,F.D., Bhattacharya,T.K., Kumar, P. and Sharma, A. (2006). DRB3.2 gene polymorphism and its association with pashmina production in Changthangi goat, Journal compilation, 33:271-276.

  17. Singh, P. K., Singh, S. V., Singh, M. K., Saxena, V. K., Singh, A. V. and Shoal, J. S. (2012). Genetic analysis of MHC class II DRB gene in an endangered Jamunapari breed of goats. Indian Journal of Biotechnology, 11:220-223.

  18. Soulsby, E.J.L. (1982). Helminths, arthropods and protozoa of domesticated animals. 7th edition Bailliere tindall, London. pp 630-637.

  19. Steel, R.G.D. and Torrie, J.H. (1980). Principles and Procedures of Statistics: A Biometrical Approach,2nd Edn., McGraw Hill International Book Company, New York, pp 633.

  20. Woolaston, R. R. and Baker, R. L. (1996). Prospects of breeding small ruminants for resistance to internal parasites. International Journal for Parasitology, 26:845-855.

  21. Yeh, F.C., Yang, R.C., Boyle Timothy, B.J., Ye, Z.H. and Mao Judy, X. (1999). POPGENE 32 version 1.32, the user-friendly shareware for population genetic analysis. Molecular Biology and Biotechnology Centre, University of Alberta, Canada.URL;http://www.ualberta.ca/~fyeh/ fyeh.

  22. Zhao, Y., Huizhong, X., Lixiang S. and Jiahua Zhang (2011). Polymorphisms in exon 2 of MHC Class II DRB3 Gene of ten Domestic Goats in Southwest China. Asian - Australasian Journal of Animal Sciences, 24(6):752 – 756.

Editorial Board

View all (0)